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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
Assay category
57
Transcription
3
DNA accessibility
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
125
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
11
July, 2019
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
129
fastq
bam
83
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
19
zippedFastqFolder
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
60
Homo sapiens
Biosample type
60
primary cell
Organ
19
epithelium
19
pancreas
Project
59
HPAP
1
AMP
Genome assembly (visualization)
3
GRCh38
Lab
59
Klaus Kaestner, Upenn
1
AMP-T2D consortium
files.file_type!
bam
bed bedMethyl
BIOSAMPLE
ASSAY
60 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
pancreatic cell
1
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