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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
8
Hi-C
5
GRO-seq
3
ATAC-seq
3
WGBS
Assay category
18
DNA methylation
8
3D chromatin structure
3
DNA accessibility
Date released
268
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
60
October, 2019
59
September, 2020
58
May, 2020
47
September, 2023
40
May, 2024
38
March, 2020
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
4
July, 2018
4
March, 2023
3
March, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
October, 2022
1
September, 2018
Available data
93
bigWig
bam
65
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
5
fastq
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
34
Homo sapiens
Biosample type
15
tissue
13
primary cell
4
in vitro differentiated cells
1
cell line
1
stem cell
Organ
8
epithelium
6
musculature of body
5
brain
4
heart
4
kidney
4
limb
3
connective tissue
3
liver
3
vasculature
2
blood vessel
2
pancreas
1
adipose tissue
1
blood
1
bodily fluid
1
embryo
1
eye
1
pericardium
Project
34
AMP
Genome assembly (visualization)
22
hg19
5
hg18
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bam
hic
BIOSAMPLE
ASSAY
34 results
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Clear Filters
RRBS
Hi-C
GRO-seq
ATAC-seq
WGBS
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
adipose tissue
1
brain
1
islet of Langerhans
1
+ See 5 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
GM12878
1
stem cell
hESC
1
See all biosamples
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