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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
20
ATAC-seq
7
total RNA-seq
4
WGBS
4
pCHi-C
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
20
DNA accessibility
Date released
10
February, 2023
4
February, 2021
3
October, 2019
2
August, 2021
1
January, 2018
Available data
9
bigWig
8
bed narrowPeak
6
bed bed3
bam
4
bed bed3+
4
bed bedgraph
4
bigBed narrowPeak
2
fastq
Organism
20
Homo sapiens
Biosample type
17
in vitro differentiated cells
3
tissue
Organ
87
pancreas
79
epithelium
75
kidney
35
artery
35
blood vessel
35
heart
35
vasculature
28
eye
20
connective tissue
20
liver
4
bone element
4
skeleton
3
adipose tissue
2
brain
1
blood
1
bodily fluid
1
musculature of body
1
pituitary gland
1
skin of body
Project
20
AMP
Genome assembly (visualization)
20
hg19
Lab
18
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
files.file_type!
bam
tar
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
in vitro differentiated cells
adipocyte
8
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
tissue
adipose tissue
3
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