Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
5
MeRIP-seq
Assay category
61
DNA binding
Target of assay
232
histone
232
histone modification
123
broad histone mark
109
narrow histone mark
37
control
29
transcription factor
11
RNA binding protein
5
nucleotide modification
Date released
20
May, 2021
19
August, 2017
15
August, 2021
5
May, 2024
5
November, 2020
1
November, 2017
1
October, 2017
Available data
bam
622
fastq
519
bigWig
469
bed narrowPeak
405
bigBed narrowPeak
77
tagAlign
49
bed broadPeak
49
bigBed broadPeak
28
bed bed3+
3
tar
3
tsv
Organism
66
Homo sapiens
Biosample type
25
tissue
19
cell line
19
in vitro differentiated cells
3
primary cell
Organ
19
liver
11
pancreas
7
connective tissue
5
adipose tissue
5
heart
3
epithelium
3
musculature of body
1
brain
Project
66
AMP
Genome assembly (visualization)
14
hg19
5
GRCh38
Lab
21
AMP-T2D consortium
20
Kyle Gaulton, UCSD
15
Bing Ren, UCSD
5
Patrick T. Ellinor, Broad
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
files.file_type!
bam
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
66 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
6
2
left cardiac atrium
5
subcutaneous abdominal adipose tissue
5
liver
3
skeletal muscle tissue
3
+ See 1 more…
cell line
HepG2
16
EndoC_BH1
3
in vitro differentiated cells
embryonic stem cell
17
adipocyte
2
primary cell
CD8-positive, alpha-beta T cell
3
See all biosamples
Download