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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
289
ATAC-seq
274
ChIP-seq
186
total RNA-seq
157
single cell RNA-seq
86
RNA microarray
78
snATAC-seq
57
WGBS
56
pCHi-C
31
Hi-C
21
RRBS
10
MeRIP-seq
5
GRO-seq
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Target of assay
5
control
5
nucleotide modification
Date released
10
November, 2020
Organism
10
Homo sapiens
Biosample type
6
cell line
4
tissue
Organ
10
pancreas
6
epithelium
Project
10
AMP
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
files.file_type!
bam
lab.title!
Maike Sander, UCSD
month_released!
August, 2021
BIOSAMPLE
ASSAY
10 results
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MeRIP-seq
cell line
EndoC_BH1
6
tissue
islet of Langerhans
4