Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
6
single cell RNA-seq
3
total RNA-seq
1
RRBS
1
pCHi-C
Assay category
35
DNA accessibility
9
Transcription
3D chromatin structure
1
DNA methylation
Date released
35
February, 2023
6
August, 2021
3
February, 2020
1
July, 2019
1
March, 2020
Available data
bam
153
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
11
bed bed3+
6
fastq
6
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
1
tar
Organism
46
Homo sapiens
Biosample type
45
tissue
1
primary cell
Organ
247
pancreas
209
kidney
199
epithelium
179
heart
106
liver
93
bone element
90
connective tissue
54
eye
49
adipose tissue
46
vasculature
45
blood vessel
40
brain
39
artery
33
musculature of body
20
lung
9
blood
9
bodily fluid
8
skeleton
5
gonad
5
ovary
4
limb
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
46
AMP
Genome assembly (visualization)
35
GRCh38
1
hg19
Lab
46
AMP-T2D consortium
files.file_type!
bam
lab.title!
Maike Sander, UCSD
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
46 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
single cell RNA-seq
total RNA-seq
RRBS
pCHi-C
tissue
coronary artery
35
1
aorta
4
1
pulmonary artery
2
ascending aorta
1
tibial artery
1
primary cell
choroid plexus epithelial cell
1
Download