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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
WGBS
17
RRBS
1
DNAme array
Assay category
405
DNA accessibility
384
Transcription
291
DNA binding
67
DNA methylation
33
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
18
July, 2019
7
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
36
bed bedMethyl
36
bigBed bedMethyl
fastq
bam
17
bigWig
6
tsv
Organism
67
Homo sapiens
Biosample type
51
primary cell
16
tissue
Organ
47
epithelium
43
pancreas
4
connective tissue
4
heart
4
kidney
4
liver
3
adipose tissue
3
musculature of body
2
brain
1
eye
1
pericardium
1
vasculature
Project
41
HPAP
26
AMP
Genome assembly (visualization)
15
hg19
Lab
41
Klaus Kaestner, Upenn
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bam
fastq
lab.title!
Stephen Parker, UMich
BIOSAMPLE
ASSAY
67 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
2
1
subcutaneous abdominal adipose tissue
3
liver
2
skeletal muscle tissue
2
brain
1
+ See 5 more…
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