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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
3
total RNA-seq
2
pCHi-C
1
RNA microarray
Assay category
3
DNA accessibility
3
Transcription
Date released
August, 2017
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
May, 2023
1
October, 2019
Available data
bam
408
bigWig
401
tsv
26
fastq
10
bed narrowPeak
8
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bedpe bed3+
Organism
8
Homo sapiens
Biosample type
8
tissue
1
in vitro differentiated cells
Organ
237
pancreas
210
kidney
207
epithelium
142
heart
93
bone element
82
liver
54
eye
51
vasculature
50
blood vessel
43
brain
39
artery
37
connective tissue
20
lung
13
musculature of body
9
adipose tissue
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
9
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
files.file_type!
bam
month_released!
August, 2017
BIOSAMPLE
ASSAY
9 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
RNA microarray
tissue
adipose tissue
3
1
1
subcutaneous adipose tissue
1
1
omental fat pad
1
in vitro differentiated cells
white fat cell
1
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