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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
snDrop-seq
Assay category
31
DNA accessibility
18
Transcription
6
DNA methylation
Date released
234
August, 2021
199
February, 2023
176
May, 2022
142
February, 2021
129
August, 2017
106
May, 2021
63
October, 2019
59
September, 2020
57
May, 2020
47
September, 2023
42
March, 2020
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
13
November, 2017
8
October, 2017
7
August, 2020
7
January, 2018
5
December, 2019
4
July, 2018
4
March, 2019
4
November, 2020
3
March, 2023
3
October, 2022
1
April, 2019
1
August, 2018
1
August, 2022
1
November, 2018
1
November, 2019
September, 2018
Available data
481
tsv
bam
468
bigWig
89
txt
45
fastq
9
bed narrowPeak
6
csv
4
bed bedgraph
1
bed bed3
1
bed bed3+
Organism
142
Homo sapiens
Biosample type
93
tissue
45
primary cell
4
in vitro differentiated cells
cell line
Organ
84
bone element
8
kidney
6
epithelium
6
pancreas
4
connective tissue
1
liver
Project
97
AMP
45
HPAP
Genome assembly (visualization)
4
hg19
Lab
97
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
32
audit script error
files.file_type!
bam
month_released!
September, 2018
biosample_type!
cell line
BIOSAMPLE
ASSAY
142 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
snDrop-seq
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 1 more…
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
in vitro differentiated cells
adipocyte
4
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