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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
2
RRBS
1
pCHi-C
Assay category
6
DNA accessibility
2
DNA methylation
Date released
6
February, 2023
2
July, 2019
1
May, 2021
Available data
bam
38
bigWig
25
bed narrowPeak
23
bigBed narrowPeak
17
tsv
7
fastq
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
9
Homo sapiens
Biosample type
87
tissue
30
cell line
14
in vitro differentiated cells
9
primary cell
1
stem cell
Organ
1
connective tissue
1
epithelium
1
heart
1
kidney
Project
8
AMP
1
T1D
Genome assembly (visualization)
2
hg19
Lab
8
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
31
audit script error
9
inconsistent ontology term
files.file_type!
bam
month_released!
September, 2018
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
RRBS
pCHi-C
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
cardiac fibroblast
1
epithelial cell of proximal tubule
1
naive B cel
1
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