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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ATAC-seq
45
total RNA-seq
41
WGBS
34
single cell RNA-seq
22
snATAC-seq
Assay category
81
DNA accessibility
79
Transcription
41
DNA methylation
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
134
zippedFastqFolder
38
bed narrowPeak
25
tsv
bam
24
fastq
20
bigWig
7
txt
1
bed bed3+
Organism
201
Homo sapiens
Biosample type
134
primary cell
67
tissue
Organ
81
pancreas
80
epithelium
41
liver
12
brain
4
musculature of body
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
1
eye
1
nerve
1
spinal cord
Project
134
HPAP
67
AMP
Genome assembly (visualization)
21
hg19
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
27
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
201 results
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Clear Filters
ATAC-seq
total RNA-seq
WGBS
single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
skeletal muscle tissue
1
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
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