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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
snATAC-seq
16
total RNA-seq
3
ATAC-seq
Assay category
56
Transcription
19
DNA accessibility
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
41
fastq
19
zippedFastqFolder
3
bigWig
Organism
75
Homo sapiens
Biosample type
67
primary cell
8
tissue
Organ
27
pancreas
19
epithelium
8
blood
8
bodily fluid
Project
59
HPAP
16
T1D
Genome assembly (visualization)
3
GRCh38
Lab
59
Klaus Kaestner, Upenn
16
Kyle Gaulton, UCSD
files.file_type!
bam
BIOSAMPLE
ASSAY
75 results
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single cell RNA-seq
snATAC-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
peripheral blood mononuclear cell
8
pancreatic beta cell
1
1
tissue
islet of Langerhans
4
pancreas
4
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