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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
Assay category
17
DNA methylation
Date released
13
July, 2019
4
August, 2017
Available data
bam
2552
bigWig
1742
bed narrowPeak
1303
fastq
1049
tsv
1008
bigBed narrowPeak
387
tagAlign
315
bed broadPeak
279
bigBed broadPeak
261
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
18
hic
15
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
17
Homo sapiens
Biosample type
9
tissue
8
primary cell
Organ
5
epithelium
3
kidney
3
musculature of body
2
brain
2
liver
2
pancreas
1
eye
1
heart
1
pericardium
1
vasculature
Project
17
AMP
Genome assembly (visualization)
17
hg19
Lab
17
AMP-T2D consortium
Audit category:
inconsistent ontology term
files.file_type!
bam
organ_slims!
adipose tissue
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
17 results
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RRBS
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 3 more…
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