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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
Assay category
83
DNA binding
Target of assay
166
histone
166
histone modification
83
broad histone mark
83
narrow histone mark
32
control
24
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
25
August, 2017
23
October, 2019
22
May, 2021
9
November, 2017
2
August, 2021
1
April, 2019
1
October, 2017
Available data
423
bigWig
412
bed narrowPeak
bam
171
tagAlign
148
bigBed narrowPeak
109
fastq
28
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
83
Homo sapiens
Biosample type
55
tissue
14
in vitro differentiated cells
12
primary cell
2
cell line
Organ
16
connective tissue
12
brain
adipose tissue
10
liver
7
musculature of body
6
pancreas
4
gonad
4
ovary
2
eye
1
heart
1
limb
1
lymph node
Project
83
AMP
Genome assembly (visualization)
23
hg19
2
GRCh38
Lab
61
AMP-T2D consortium
20
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
files.file_type!
bam
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
83 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
27
liver
8
skeletal muscle tissue
7
cingulate gyrus
4
substantia nigra
2
+ See 7 more…
in vitro differentiated cells
embryonic stem cell
10
adipocyte
4
primary cell
CD8-positive, alpha-beta T cell
10
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
cell line
HepG2
2
See all biosamples
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