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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
Assay category
10
DNA accessibility
Date released
10
February, 2023
Available data
bam
2868
bigWig
1666
bed narrowPeak
1444
tsv
1101
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
10
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
Organ
5
connective tissue
4
bone element
4
skeleton
1
brain
Project
10
AMP
Genome assembly (visualization)
10
hg19
Lab
10
AMP-T2D consortium
files.file_type!
bam
organ_slims!
epithelium
assay_title!
HiChIP
BIOSAMPLE
ASSAY
10 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
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