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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
293
ChIP-seq
277
ATAC-seq
255
single cell RNA-seq
190
total RNA-seq
86
RNA microarray
84
snATAC-seq
56
pCHi-C
26
Hi-C
15
RRBS
10
WGBS
5
GRO-seq
5
STARR-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
DNase-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
10
DNA methylation
Date released
7
August, 2017
3
July, 2019
Available data
bam
17
bed bedMethyl
17
bigBed bedMethyl
17
bigWig
11
fastq
Organism
10
Homo sapiens
Biosample type
10
tissue
Organ
epithelium
47
pancreas
4
adipose tissue
4
connective tissue
4
liver
2
heart
Project
10
AMP
Lab
10
AMP-T2D consortium
files.file_type!
bam
csv
organ_slims!
epithelium
BIOSAMPLE
ASSAY
10 results
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Clear Filters
WGBS
tissue
liver
3
subcutaneous abdominal adipose tissue
3
heart left ventricle
2
adipose tissue
1
right lobe of liver
1
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