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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
single cell RNA-seq
22
snATAC-seq
20
ATAC-seq
20
total RNA-seq
Assay category
54
Transcription
42
DNA accessibility
Date released
268
August, 2021
153
February, 2023
137
February, 2021
129
August, 2017
106
May, 2021
96
May, 2022
61
October, 2019
58
May, 2020
47
September, 2023
45
March, 2020
40
September, 2020
25
February, 2020
19
April, 2020
18
July, 2019
16
January, 2021
15
May, 2023
14
November, 2017
8
January, 2018
8
October, 2017
5
March, 2023
4
December, 2019
4
July, 2018
4
March, 2019
4
November, 2020
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
November, 2019
1
October, 2022
1
September, 2018
Available data
54
zippedFastqFolder
38
bed narrowPeak
bam
24
fastq
20
bigWig
7
txt
1
bed bed3+
Organism
96
Homo sapiens
Biosample type
54
primary cell
42
tissue
Organ
epithelium
80
pancreas
40
liver
2
musculature of body
Project
54
HPAP
42
AMP
Genome assembly (visualization)
21
hg19
Lab
54
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
2
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bam
organ_slims!
epithelium
BIOSAMPLE
ASSAY
96 results
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single cell RNA-seq
snATAC-seq
ATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
tissue
liver
20
20
skeletal muscle tissue
1
1
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