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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ATAC-seq
8
snATAC-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
44
DNA accessibility
4
Transcription
Date released
35
February, 2023
8
January, 2021
2
August, 2021
2
February, 2020
1
January, 2018
Available data
bam
140
bigWig
128
bed narrowPeak
79
bigBed narrowPeak
60
fastq
58
tsv
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
48
Homo sapiens
Biosample type
39
tissue
8
primary cell
1
cell line
Organ
257
pancreas
210
kidney
207
epithelium
182
heart
110
liver
93
bone element
91
connective tissue
54
eye
51
vasculature
50
blood vessel
49
adipose tissue
43
brain
39
artery
39
musculature of body
20
lung
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
40
AMP
8
T1D
Genome assembly (visualization)
35
GRCh38
1
hg19
Lab
40
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
bam
organ_slims!
nerve
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ATAC-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
35
1
pulmonary artery
2
tibial artery
1
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
1
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