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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
4
ChIP-seq
1
ATAC-seq
1
pCHi-C
Assay category
9
DNA accessibility
4
DNA binding
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
8
January, 2021
4
October, 2019
1
January, 2018
1
March, 2020
Available data
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
tsv
Organism
14
Homo sapiens
Biosample type
8
primary cell
5
tissue
1
cell line
Organ
257
pancreas
210
kidney
207
epithelium
182
heart
110
liver
93
bone element
91
connective tissue
54
eye
51
vasculature
50
blood vessel
49
adipose tissue
43
brain
39
artery
39
musculature of body
20
lung
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
8
T1D
6
AMP
Genome assembly (visualization)
1
hg19
Lab
8
Kyle Gaulton, UCSD
6
AMP-T2D consortium
files.file_type!
bam
files.file_type!!
bam
BIOSAMPLE
ASSAY
14 results
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Clear Filters
snATAC-seq
ChIP-seq
ATAC-seq
pCHi-C
primary cell
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
4
ovary
1
cell line
GM12878
1
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