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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
8
snATAC-seq
5
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
13
DNA accessibility
4
Transcription
Date released
84
February, 2021
8
February, 2023
8
January, 2021
1
January, 2018
1
May, 2021
Available data
bam
113
bigWig
88
txt
62
bed narrowPeak
60
fastq
58
tsv
54
bigBed narrowPeak
4
bed bed3
Organism
102
Homo sapiens
Biosample type
92
tissue
9
primary cell
1
cell line
Organ
257
pancreas
210
kidney
207
epithelium
142
heart
110
liver
93
bone element
91
connective tissue
54
eye
51
vasculature
50
blood vessel
49
adipose tissue
43
brain
39
artery
39
musculature of body
20
lung
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
93
AMP
9
T1D
Genome assembly (visualization)
5
hg19
Lab
93
AMP-T2D consortium
9
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
102 results
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Clear Filters
RNA microarray
snATAC-seq
ATAC-seq
total RNA-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
primary cell
peripheral blood mononuclear cell
8
megakaryocyte
1
cell line
GM12878
1
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