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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
20
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
Available data
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
26
Homo sapiens
Biosample type
25
tissue
1
primary cell
Organ
170
pancreas
135
kidney
128
epithelium
107
heart
90
liver
89
bone element
71
connective tissue
46
adipose tissue
41
brain
38
musculature of body
26
eye
20
lung
16
vasculature
15
blood vessel
8
blood
8
bodily fluid
8
limb
5
gonad
5
ovary
4
artery
4
skeleton
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
1
hg19
Lab
26
AMP-T2D consortium
files.file_type!
bam
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
26 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
2
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
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