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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
19
Transcription
2
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
Available data
bed narrowPeak
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
27
Homo sapiens
Biosample type
26
tissue
1
primary cell
Organ
251
pancreas
195
epithelium
146
kidney
106
heart
93
bone element
87
connective tissue
76
liver
47
adipose tissue
42
brain
27
eye
26
musculature of body
20
lung
16
vasculature
15
blood vessel
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
4
artery
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
1
hg19
Lab
27
AMP-T2D consortium
files.file_type!
bam
bed narrowPeak
BIOSAMPLE
ASSAY
27 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
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