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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
Hi-C
1
GRO-seq
1
pCHi-C
Assay category
4
DNA binding
2
3D chromatin structure
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
5
October, 2019
2
March, 2020
1
January, 2018
Available data
bam
44
bigWig
27
bed narrowPeak
27
fastq
15
tsv
13
bigBed narrowPeak
5
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
Organism
8
Homo sapiens
Biosample type
5
tissue
2
primary cell
1
in vitro differentiated cells
Organ
257
pancreas
210
kidney
207
epithelium
182
heart
110
liver
93
bone element
91
connective tissue
54
eye
51
vasculature
50
blood vessel
49
adipose tissue
43
brain
39
artery
39
musculature of body
20
lung
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
8
AMP
Genome assembly (visualization)
2
hg19
1
hg18
Lab
8
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bam
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ChIP-seq
Hi-C
GRO-seq
pCHi-C
tissue
islet of Langerhans
4
ovary
1
primary cell
endothelial cell of umbilical vein
2
in vitro differentiated cells
pancreatic endoderm
1
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