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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
7
WGBS
6
RRBS
1
DNase-seq
Assay category
55
DNA binding
13
DNA methylation
1
DNA accessibility
Target of assay
96
histone
96
histone modification
broad histone mark
36
narrow histone mark
19
control
Date released
268
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
90
May, 2021
69
August, 2017
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
10
November, 2017
10
November, 2020
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
3
October, 2017
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
238
fastq
bam
211
bigWig
89
tsv
86
bed narrowPeak
40
tagAlign
27
bed bed3+
24
bigBed narrowPeak
19
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
69
Homo sapiens
Biosample type
62
tissue
6
in vitro differentiated cells
1
primary cell
Organ
26
connective tissue
20
adipose tissue
16
liver
14
musculature of body
12
pancreas
Project
69
AMP
Genome assembly (visualization)
12
hg19
Lab
69
AMP-T2D consortium
files.file_type!
bam
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
tissue
subcutaneous abdominal adipose tissue
16
3
liver
11
3
1
skeletal muscle tissue
10
4
islet of Langerhans
12
adipose tissue
1
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in vitro differentiated cells
adipocyte
6
primary cell
skeletal muscle myoblast
1
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