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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
8
Hi-C
3
WGBS
Assay category
18
DNA methylation
8
3D chromatin structure
Date released
204
February, 2023
164
August, 2021
142
May, 2022
129
August, 2017
125
February, 2021
122
May, 2021
64
October, 2019
58
May, 2020
48
March, 2020
40
May, 2024
26
July, 2019
25
February, 2020
19
September, 2020
16
January, 2021
14
November, 2017
12
May, 2023
10
April, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
March, 2023
5
November, 2020
4
July, 2018
4
March, 2019
4
October, 2022
2
December, 2019
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
Available data
82
bigWig
bam
62
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
26
Homo sapiens
Biosample type
13
primary cell
13
tissue
Organ
8
epithelium
5
brain
5
musculature of body
4
heart
4
kidney
4
limb
3
liver
3
vasculature
2
blood vessel
2
connective tissue
2
pancreas
1
eye
1
pericardium
Project
26
AMP
Genome assembly (visualization)
19
hg19
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bam
target.investigated_as!
nucleotide modification
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
26 results
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Clear Filters
RRBS
Hi-C
WGBS
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
brain
1
islet of Langerhans
1
kidney
1
+ See 3 more…
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