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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
101
ChIP-seq
Assay category
101
DNA binding
Target of assay
193
histone
193
histone modification
101
broad histone mark
92
narrow histone mark
33
control
13
transcription factor
5
RNA binding protein
5
nucleotide modification
Date released
60
August, 2017
32
May, 2021
5
October, 2017
4
November, 2017
August, 2021
Available data
399
bigWig
392
bed narrowPeak
bam
242
bigBed narrowPeak
140
tagAlign
118
fastq
36
bed broadPeak
16
bigBed broadPeak
11
bed bed3+
Organism
101
Homo sapiens
Biosample type
61
tissue
22
primary cell
18
in vitro differentiated cells
Organ
28
connective tissue
20
adipose tissue
12
liver
12
musculature of body
9
brain
8
pancreas
Project
101
AMP
Genome assembly (visualization)
32
hg19
Lab
71
AMP-T2D consortium
30
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
files.file_type!
bam
month_released!
August, 2021
BIOSAMPLE
ASSAY
101 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
liver
12
skeletal muscle tissue
12
islet of Langerhans
8
brain
5
+ See 2 more…
primary cell
CD8-positive, alpha-beta T cell
20
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
1
in vitro differentiated cells
embryonic stem cell
10
adipocyte
8
See all biosamples
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