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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
431
ChIP-seq
5
total RNA-seq
Assay category
431
DNA binding
5
Transcription
Target of assay
258
transcription factor
95
histone
95
histone modification
75
control
66
recombinant protein
54
broad histone mark
43
RNA binding protein
41
narrow histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
Date released
713
February, 2021
406
November, 2017
396
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
422
bam
360
bigWig
354
fastq
334
bed narrowPeak
333
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
5
tsv
3
tar
Organism
436
Homo sapiens
Biosample type
338
cell line
89
tissue
9
primary cell
Organ
320
liver
91
brain
18
blood
18
bodily fluid
7
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
436
AMP
Genome assembly (visualization)
307
hg19
306
GRCh38
Lab
436
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed bed3+
assay_title!
DNAme array
BIOSAMPLE
ASSAY
436 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
5
GM12878
18
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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