Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
44
single cell RNA-seq
7
WGBS
6
total RNA-seq
1
FAIRE-seq
Assay category
70
DNA binding
50
Transcription
7
DNA methylation
1
DNA accessibility
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
86
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
136
bam
132
fastq
129
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
49
tsv
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
128
Homo sapiens
Biosample type
61
cell line
44
primary cell
23
tissue
Organ
50
liver
44
pancreas
33
epithelium
15
blood
15
bodily fluid
8
spleen
2
connective tissue
Project
128
AMP
Genome assembly (visualization)
119
GRCh38
111
hg19
Lab
128
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed bed3+
assay_title!
small RNA-seq
BIOSAMPLE
ASSAY
128 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
WGBS
total RNA-seq
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
+ See 5 more…
tissue
spleen
6
2
islet of Langerhans
6
liver
4
pancreas
2
1
body of pancreas
2
See all biosamples
Download