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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
1
ATAC-seq
Assay category
60
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
Organism
61
Homo sapiens
Biosample type
61
cell line
Organ
704
liver
690
pancreas
651
connective tissue
483
adipose tissue
339
epithelium
315
heart
249
brain
221
vasculature
218
blood vessel
158
bone element
137
artery
85
limb
81
kidney
61
blood
61
bodily fluid
58
musculature of body
56
eye
41
nerve
34
embryo
22
spleen
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
61
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
61
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
files.file_type!
bed bed3+
bed bedMethyl
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
ATAC-seq
cell line
GM12878
60
1
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