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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
3
WGBS
1
single cell RNA-seq
Assay category
70
DNA binding
3
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
677
February, 2021
406
November, 2017
341
May, 2020
336
May, 2021
310
August, 2021
290
October, 2019
209
August, 2017
142
February, 2023
118
May, 2019
98
July, 2019
95
May, 2022
80
April, 2019
79
December, 2017
74
November, 2018
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
5
March, 2023
5
November, 2020
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
81
fastq
80
bam
73
bigWig
70
bed narrowPeak
70
bigBed narrowPeak
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
74
Homo sapiens
Biosample type
61
cell line
12
tissue
1
primary cell
Organ
50
liver
15
blood
15
bodily fluid
8
spleen
pancreas
Project
74
AMP
Genome assembly (visualization)
66
GRCh38
61
hg19
Lab
74
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed bed3+
bed bedgraph
organ_slims!
pancreas
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
2
liver
4
primary cell
pancreatic cell
1
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