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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
Assay category
401
Transcription
61
DNA binding
6
DNA accessibility
6
DNA methylation
Target of assay
25
histone
25
histone modification
23
control
16
broad histone mark
13
transcription factor
9
narrow histone mark
5
RNA binding protein
Date released
38
August, 2017
23
October, 2018
Available data
37
bam
37
fastq
19
bigWig
tagAlign
7
bed narrowPeak
6
bigBed narrowPeak
bed bed3+
1
bed broadPeak
Organism
61
Homo sapiens
Biosample type
61
tissue
Organ
463
liver
178
pancreas
128
heart
122
epithelium
120
connective tissue
100
brain
96
vasculature
93
blood vessel
66
limb
61
adipose tissue
60
blood
60
bodily fluid
52
kidney
35
nerve
28
artery
24
musculature of body
20
spleen
19
embryo
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
Project
61
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
61
AMP-T2D consortium
Audit category:
8
missing controlled_by
files.file_type!
bed bed3+
tagAlign
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
28
subcutaneous adipose tissue
12
omental fat pad
11
white adipose tissue
8
adipose tissue
2
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