Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
44
ATAC-seq
11
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
44
DNA accessibility
11
DNA binding
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
66
February, 2021
35
February, 2023
October, 2019
5
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
Available data
76
bam
64
bigWig
58
tsv
53
bed narrowPeak
6
tagAlign
5
bigBed narrowPeak
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
113
Homo sapiens
Biosample type
66
cell line
45
tissue
2
primary cell
Organ
901
pancreas
771
liver
653
connective tissue
484
adipose tissue
470
epithelium
315
heart
246
kidney
180
vasculature
176
blood vessel
165
brain
159
bone element
113
artery
69
blood
69
bodily fluid
62
musculature of body
36
eye
34
embryo
24
spleen
21
limb
20
lung
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
113
AMP
Genome assembly (visualization)
105
GRCh38
70
hg19
Lab
113
AMP-T2D consortium
files.file_type!
bed bed3+
month_released!
October, 2019
BIOSAMPLE
ASSAY
113 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
5
pulmonary artery
2
tibial artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download