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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
55
DNA binding
7
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
52
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
3
control
3
other context
3
other post-translational modification
Date released
713
February, 2021
368
November, 2017
333
May, 2021
314
May, 2020
305
August, 2021
296
August, 2017
201
February, 2023
199
May, 2022
168
July, 2018
165
October, 2019
104
July, 2019
86
May, 2019
68
December, 2017
65
October, 2018
64
November, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
31
February, 2018
25
February, 2020
25
May, 2024
21
October, 2017
20
June, 2019
19
April, 2020
15
May, 2023
15
November, 2020
10
December, 2019
10
January, 2019
9
September, 2017
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
73
fastq
72
bam
68
bigWig
61
bed narrowPeak
61
bigBed narrowPeak
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
64
Homo sapiens
Biosample type
46
cell line
17
tissue
1
primary cell
Organ
50
liver
blood
15
bodily fluid
8
spleen
5
pancreas
Project
64
AMP
Genome assembly (visualization)
58
GRCh38
50
hg19
Lab
64
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed bed3+
organ_slims!
blood
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ChIP-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
tissue
spleen
6
2
liver
4
pancreas
2
1
body of pancreas
2
primary cell
pancreatic cell
1
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