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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
Assay category
69
DNA binding
Target of assay
45
histone
45
histone modification
24
narrow histone mark
24
transcription factor
21
broad histone mark
6
chromatin remodeller
2
RNA binding protein
Date released
32
September, 2018
25
August, 2017
10
November, 2017
2
November, 2018
Available data
85
bam
85
fastq
83
bigWig
45
bed narrowPeak
bed bed3+
12
bigBed narrowPeak
Organism
69
Homo sapiens
Biosample type
44
primary cell
12
cell line
8
tissue
5
in vitro differentiated cells
Organ
44
pancreas
21
epithelium
13
connective tissue
12
liver
8
adipose tissue
brain
Project
69
AMP
Genome assembly (visualization)
69
hg19
62
GRCh38
Lab
69
AMP-T2D consortium
Audit category:
69
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
files.file_type!
bed bed3+
organ_slims!
brain
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
cell line
HepG2
12
tissue
white adipose tissue
8
in vitro differentiated cells
adipocyte
5
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