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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ATAC-seq
10
total RNA-seq
1
single cell RNA-seq
Assay category
73
DNA accessibility
11
Transcription
Date released
642
February, 2021
400
November, 2017
349
August, 2017
296
May, 2020
273
October, 2019
145
August, 2021
138
May, 2021
135
July, 2018
115
May, 2019
93
July, 2019
84
February, 2023
80
April, 2019
79
November, 2018
74
October, 2018
60
December, 2017
58
March, 2020
45
November, 2019
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
25
June, 2019
22
October, 2017
16
April, 2018
12
September, 2018
8
January, 2018
5
November, 2020
4
December, 2019
4
September, 2017
2
June, 2018
1
August, 2018
1
August, 2022
1
May, 2022
1
May, 2023
1
October, 2022
Available data
51
bed narrowPeak
14
tsv
10
bed bed3
bed bed3+
4
txt
Organism
84
Homo sapiens
Biosample type
63
tissue
12
primary cell
9
in vitro differentiated cells
Organ
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
epithelium
10
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
1
pancreas
Project
84
AMP
Genome assembly (visualization)
35
GRCh38
26
hg19
Lab
84
AMP-T2D consortium
39
Klaus Kaestner, Upenn
23
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
8
inconsistent ontology term
files.file_type!
bed bed3+
organ_slims!
epithelium
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
tissue
coronary artery
35
retina
15
2
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
+ See 4 more…
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
adipocyte
1
preadipocyte
1
See all biosamples
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