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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
124
total RNA-seq
15
single cell RNA-seq
4
MeRIP-seq
1
ATAC-seq
Assay category
139
Transcription
1
DNA accessibility
Target of assay
2
control
2
nucleotide modification
Date released
681
February, 2021
400
November, 2017
371
May, 2021
349
August, 2017
341
May, 2020
311
August, 2021
273
October, 2019
149
February, 2023
135
July, 2018
119
May, 2022
115
May, 2019
93
July, 2019
80
April, 2019
79
November, 2018
74
October, 2018
60
December, 2017
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
25
June, 2019
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
9
November, 2020
8
January, 2018
5
March, 2019
5
March, 2023
4
December, 2019
4
September, 2017
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
137
bam
136
bigWig
135
tsv
17
fastq
2
bed narrowPeak
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
144
Homo sapiens
Biosample type
124
tissue
20
primary cell
Organ
167
pancreas
epithelium
7
connective tissue
Project
144
AMP
Genome assembly (visualization)
136
GRCh38
136
hg19
Lab
140
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
5
inconsistent ontology term
files.file_type!
bed bed3+
organ_slims!
epithelium
BIOSAMPLE
ASSAY
144 results
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total RNA-seq
single cell RNA-seq
MeRIP-seq
ATAC-seq
tissue
islet of Langerhans
120
4
primary cell
osteoblast
4
1
pancreatic cell
3
co-expressing pancreatic endocrine cell
2
mast cell
2
pancreatic epsilon cell
2
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