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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
Hi-C
Assay category
1711
Transcription
1692
DNA binding
504
DNA accessibility
44
DNA methylation
23
3D chromatin structure
1
DNA sequencing
Date released
9
March, 2020
4
July, 2019
3
August, 2021
3
October, 2019
1
December, 2018
1
March, 2019
1
March, 2023
1
November, 2019
Available data
17
hic
15
bedpe bed3+
bed bed3+
3
bigWig
3
hdf5
1
bedpe
1
fastq
Organism
23
Homo sapiens
Biosample type
16
tissue
4
in vitro differentiated cells
2
cell line
1
primary cell
Organ
8
pancreas
epithelium
6
musculature of body
4
limb
3
blood vessel
3
heart
3
liver
3
vasculature
2
vein
1
kidney
Project
22
AMP
1
ITG
Genome assembly (visualization)
16
hg19
1
GRCh38
Lab
18
AMP-T2D consortium
3
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
4
inconsistent ontology term
files.file_type!
bed bed3+
organ_slims!
epithelium
skeleton
BIOSAMPLE
ASSAY
23 results
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Hi-C
tissue
gastrocnemius medialis
4
islet of Langerhans
3
psoas muscle
2
aorta
1
heart
1
+ See 5 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
HepG2
2
primary cell
chondrocytes
1
See all biosamples
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