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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
single cell RNA-seq
5
ATAC-seq
Assay category
47
Transcription
5
DNA accessibility
Date released
47
September, 2023
3
February, 2023
2
August, 2021
Available data
5
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
bed bed3+
Organism
52
Homo sapiens
Biosample type
47
tissue
5
in vitro differentiated cells
Organ
47
kidney
2
connective tissue
Project
47
KPMP
5
AMP
Genome assembly (visualization)
5
hg19
Lab
3623
AMP-T2D consortium
341
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
5
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
files.file_type!
bed bed3+
organ_slims!
vein
BIOSAMPLE
ASSAY
52 results
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single cell RNA-seq
ATAC-seq
tissue
kidney
47
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
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