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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
224
ChIP-seq
1
FAIRE-seq
Assay category
224
DNA binding
1
DNA accessibility
Target of assay
168
histone
168
histone modification
107
narrow histone mark
61
broad histone mark
54
transcription factor
13
RNA binding protein
10
chromatin remodeller
Date released
75
October, 2019
64
November, 2017
27
December, 2018
25
May, 2019
15
January, 2019
12
November, 2018
6
October, 2017
1
July, 2019
Available data
303
bam
277
bigWig
257
bed narrowPeak
181
bigBed narrowPeak
118
tagAlign
81
fastq
47
bed broadPeak
38
bigBed broadPeak
bed bed3+
26
tsv
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
225
Homo sapiens
Biosample type
165
tissue
54
cell line
6
primary cell
Organ
431
liver
197
pancreas
171
brain
161
heart
132
epithelium
122
vasculature
120
blood vessel
105
kidney
70
artery
61
connective tissue
56
limb
54
blood
54
bodily fluid
29
eye
27
musculature of body
25
nerve
13
spleen
12
embryo
11
adipose tissue
11
vein
8
bone element
8
skeleton
1
pituitary gland
Project
225
AMP
Genome assembly (visualization)
223
GRCh38
173
hg19
Lab
225
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
inconsistent control
Audit category:
3
missing controlled_by
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
225 results
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Clear Filters
ChIP-seq
FAIRE-seq
tissue
layer of hippocampus
17
angular gyrus
14
temporal lobe
13
caudate nucleus
12
substantia nigra
12
+ See 62 more…
cell line
GM12878
54
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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