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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
ChIP-seq
Assay category
109
DNA binding
Target of assay
336
transcription factor
107
control
100
histone modification
99
histone
82
recombinant protein
58
RNA binding protein
58
narrow histone mark
41
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
58
November, 2017
23
May, 2020
13
December, 2017
10
August, 2017
5
August, 2021
Available data
103
bam
79
fastq
28
tagAlign
15
bigWig
2
bed narrowPeak
2
bigBed narrowPeak
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
109
Homo sapiens
Biosample type
62
cell line
45
tissue
1
in vitro differentiated cells
1
primary cell
Organ
109
liver
51
pancreas
34
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
11
spleen
9
artery
6
blood
6
bodily fluid
6
embryo
6
musculature of body
2
vein
1
eye
Project
109
AMP
Genome assembly (visualization)
15
hg19
2
GRCh38
Lab
105
AMP-T2D consortium
4
Bing Ren, UCSD
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bed bed3+
BIOSAMPLE
ASSAY
109 results
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ChIP-seq
cell line
HepG2
62
tissue
liver
42
right lobe of liver
3
in vitro differentiated cells
hepatocyte
1
primary cell
hepatocyte
1
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