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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
Assay category
121
DNA binding
Target of assay
234
histone
234
histone modification
121
broad histone mark
113
narrow histone mark
35
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
66
May, 2021
17
September, 2018
16
August, 2017
12
October, 2019
8
June, 2019
2
May, 2019
Available data
118
bigWig
112
bed narrowPeak
100
bam
51
tagAlign
33
fastq
21
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
bed bed3+
Organism
121
Homo sapiens
Biosample type
277
tissue
121
primary cell
52
in vitro differentiated cells
19
cell line
Organ
30
epithelium
27
pancreas
9
blood vessel
9
vasculature
9
vein
5
kidney
4
connective tissue
4
musculature of body
Project
77
AMP
44
T1D
Genome assembly (visualization)
117
hg19
95
GRCh38
Lab
64
Kyle Gaulton, UCSD
57
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent assembly
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
121 results
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ChIP-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
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