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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
DNA methylation
Date released
93
May, 2022
19
September, 2020
Available data
432
bam
395
fastq
239
bigWig
194
tsv
185
bed narrowPeak
161
txt
152
tagAlign
112
zippedFastqFolder
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
18
bigBed broadPeak
15
bed bed3+
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
112
Homo sapiens
Biosample type
112
primary cell
Organ
39
epithelium
39
pancreas
Project
112
HPAP
Lab
112
Klaus Kaestner, Upenn
files.file_type!
bed bed3
assembly!
GRCh38
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
112 results
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single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
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