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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1285
total RNA-seq
249
ATAC-seq
186
DNase-seq
100
single cell RNA-seq
27
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
Assay category
100
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
3
August, 2018
3
July, 2019
3
June, 2018
Available data
100
bam
100
bigWig
100
tsv
92
fastq
Organism
100
Homo sapiens
Biosample type
100
primary cell
Organ
74
pancreas
70
epithelium
4
connective tissue
3
brain
Project
100
AMP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
100
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
files.file_type!
bed bed3
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
100 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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