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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
Assay category
68
DNA binding
Target of assay
68
histone
68
histone modification
48
transcription factor
36
broad histone mark
32
narrow histone mark
20
control
6
RNA binding protein
2
chromatin remodeller
Date released
30
May, 2021
20
August, 2017
8
May, 2020
3
August, 2021
3
November, 2017
2
October, 2019
1
April, 2019
1
May, 2019
Available data
68
bigWig
64
bed narrowPeak
31
tagAlign
25
bed broadPeak
13
bam
4
bigBed broadPeak
2
fastq
1
bigBed narrowPeak
Organism
68
Homo sapiens
Biosample type
32
primary cell
31
tissue
5
cell line
Organ
14
musculature of body
13
liver
6
pancreas
2
blood vessel
2
epithelium
2
vasculature
2
vein
1
adipose tissue
1
brain
1
connective tissue
1
heart
1
limb
Project
68
AMP
Genome assembly (visualization)
GRCh38
783
hg19
Lab
35
AMP-T2D consortium
30
Kyle Gaulton, UCSD
3
Bing Ren, UCSD
Audit category:
2
inconsistent control read length
files.file_type!
bed bed3
assembly!
GRCh38
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ChIP-seq
primary cell
CD8-positive, alpha-beta T cell
30
endothelial cell of umbilical vein
2
tissue
skeletal muscle tissue
13
liver
8
islet of Langerhans
6
cingulate gyrus
1
heart left ventricle
1
+ See 2 more…
cell line
HepG2
5
See all biosamples
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