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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
42
DNA binding
9
DNA accessibility
Target of assay
37
transcription factor
4
RNA binding protein
4
chromatin remodeller
3
control
Date released
27
December, 2018
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
42
bam
42
fastq
40
bigWig
39
bed narrowPeak
39
bigBed narrowPeak
Organism
51
Homo sapiens
Biosample type
43
cell line
8
primary cell
Organ
795
pancreas
682
liver
600
connective tissue
459
adipose tissue
431
epithelium
324
kidney
296
heart
165
vasculature
160
blood vessel
155
bone element
121
artery
98
brain
73
limb
63
musculature of body
58
eye
51
blood
51
bodily fluid
25
embryo
20
lung
19
nerve
18
spleen
18
ureter
12
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
43
AMP
8
T1D
Genome assembly (visualization)
40
hg19
39
GRCh38
Lab
43
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
files.file_type!
bed bed3
month_released!
January, 2019
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
42
1
primary cell
peripheral blood mononuclear cell
8
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