Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
37
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
47
DNA binding
38
Transcription
14
DNA accessibility
Target of assay
42
histone
42
histone modification
22
broad histone mark
20
narrow histone mark
5
control
Date released
713
February, 2021
411
August, 2017
406
November, 2017
397
May, 2021
341
May, 2020
314
October, 2019
311
August, 2021
218
June, 2019
200
May, 2022
195
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
81
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
26
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
99
fastq
98
bam
93
bigWig
56
bed narrowPeak
37
tsv
14
bigBed narrowPeak
1
csv
Organism
99
Homo sapiens
Biosample type
73
primary cell
26
in vitro differentiated cells
Organ
72
pancreas
61
epithelium
embryo
Project
99
AMP
Genome assembly (visualization)
93
GRCh38
93
hg19
Lab
99
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
2
inconsistent control read length
files.file_type!
bed bed3
organ_slims!
embryo
BIOSAMPLE
ASSAY
99 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
in vitro differentiated cells
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
primitive gut cell
3
2
+ See 1 more…
See all biosamples
Download