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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
2
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
2
DNA accessibility
Date released
144
February, 2021
4
February, 2023
1
May, 2021
Available data
88
txt
60
bam
58
bigWig
58
tsv
bed bed3
2
bed narrowPeak
Organism
149
Homo sapiens
Biosample type
148
tissue
1
primary cell
Organ
946
pancreas
790
liver
678
connective tissue
524
epithelium
491
adipose tissue
354
kidney
353
heart
285
brain
236
vasculature
230
blood vessel
155
bone element
141
artery
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
148
AMP
1
T1D
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
148
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bed bed3
organ_slims!
limb
BIOSAMPLE
ASSAY
149 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
distal epiphysis
1
ilium
1
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primary cell
megakaryocyte
1
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