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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
6
total RNA-seq
Assay category
7
DNA accessibility
6
Transcription
Date released
6
May, 2022
4
June, 2019
2
November, 2018
1
October, 2019
Available data
689
bam
623
bigWig
471
fastq
417
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
13
Homo sapiens
Biosample type
12
tissue
1
cell line
Organ
140
kidney
88
bone element
63
liver
38
brain
36
limb
34
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
13
pancreas
9
connective tissue
4
artery
4
eye
4
skeleton
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
13
AMP
Genome assembly (visualization)
7
GRCh38
5
hg19
Lab
7
AMP-T2D consortium
6
Kyle Gaulton, UCSD
files.file_type!
bed bed3
BIOSAMPLE
ASSAY
13 results
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DNase-seq
total RNA-seq
tissue
islet of Langerhans
6
body of pancreas
4
pancreas
2
cell line
Panc1
1
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