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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
22
ATAC-seq
4
DNase-seq
2
FAIRE-seq
Assay category
59
DNA binding
28
DNA accessibility
Target of assay
49
histone
49
histone modification
30
broad histone mark
19
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
17
August, 2017
14
September, 2018
7
October, 2019
5
September, 2017
June, 2019
3
November, 2018
1
May, 2019
Available data
685
bam
619
bigWig
471
fastq
417
tsv
210
bed narrowPeak
87
bigBed narrowPeak
80
zippedFastqFolder
25
bed bed3+
19
tagAlign
17
bed broadPeak
7
bedpe bed3+
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
bigBed broadPeak
3
cool
1
bedpe
1
hdf5
Organism
81
Homo sapiens
Biosample type
58
tissue
22
primary cell
7
cell line
Organ
356
liver
97
brain
87
pancreas
76
vasculature
74
blood vessel
61
heart
58
epithelium
54
blood
54
bodily fluid
52
limb
26
nerve
24
kidney
23
artery
13
connective tissue
13
spleen
13
vein
9
adipose tissue
6
musculature of body
Project
87
AMP
Genome assembly (visualization)
87
hg19
85
GRCh38
Lab
87
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
files.file_type!
bed bed3
month_released!
June, 2019
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
2
endocrine pancreas
14
pancreas
13
1
islet of Langerhans
1
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
Panc1
6
1
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