Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
18
DNase-seq
8
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
26
DNA accessibility
Date released
150
February, 2021
18
June, 2019
4
February, 2023
1
May, 2021
Available data
88
txt
84
bam
76
bigWig
58
tsv
26
bed narrowPeak
18
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
18
bigBed narrowPeak
bed bed3
Organism
173
Homo sapiens
Biosample type
172
tissue
1
primary cell
Organ
946
pancreas
790
liver
678
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
285
brain
236
vasculature
230
blood vessel
155
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
172
AMP
1
T1D
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
172
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bed bed3
organ_slims!
eye
BIOSAMPLE
ASSAY
173 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
+ See 12 more…
primary cell
megakaryocyte
1
See all biosamples
Download